BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F10SP1|AL426402
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig122 1096 0.0
3x_Contig1591 432 e-121
>3x_Contig122
Length = 831
Score = 1096 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Plus
Query: 261 tcttattctttggattcaatatatacacacactttctattcaacctggcacattgccaac 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttattctttggattcaatatatacacacactttctattcaacctggcacattgccaac 60
Query: 321 aggtcggtttgccctcgtcacatttcatccgtcttttcttacactccaaacaaccatttc 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtcggtttgccctcgtcacatttcatccgtcttttcttacactccaaacaaccatttc 120
Query: 381 tagaatacttacgcttgacgattttcccatctgcatctgtcgagggtgttgcacccgatg 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagaatacttacgcttgacgattttcccatctgcatctgtcgagggtgttgcacccgatg 180
Query: 441 catctacggaagagattccagatgcaggtgacatagatgaacgatcaccttgtaaaatat 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catctacggaagagattccagatgcaggtgacatagatgaacgatcaccttgtaaaatat 240
Query: 501 cagagatcggcgatagattggtaactagcacatctcttggacttggtccgatagaagtag 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagagatcggcgatagattggtaactagcacatctcttggacttggtccgatagaagtag 300
Query: 561 gtgtatttttcaactgaaccgactgaggactagtgattacgtgttcagaggaaagtccaa 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgtatttttcaactgaaccgactgaggactagtgattacgtgttcagaggaaagtccaa 360
Query: 621 gcagagtagcagtactgggcactgaatgcggacttggatgcgctagtaacgtcgaaggag 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcagagtagcagtactgggcactgaatgcggacttggatgcgctagtaacgtcgaaggag 420
Query: 681 acagaatatgtctgctactagctgggaatagtggcggctggcttgccctgacactttggg 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acagaatatgtctgctactagctgggaatagtggcggctggcttgccctgacactttggg 480
Query: 741 tcggtgctggtgcctcaggtgccgcaccttgagacacatacgatgctggagtgagacaat 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcggtgctggtgcctcaggtgccgcaccttgagacacatacgatgctggagtgagacaat 540
Query: 801 ccaaactctcatt 813
|||||||||||||
Sbjct: 541 ccaaactctcatt 553
>3x_Contig1591
Length = 14045
Score = 432 bits (218), Expect = e-121
Identities = 221/222 (99%)
Strand = Plus / Minus
Query: 1 aaccaaagagtcattcaacttcatactaacaatgtcgttgagattctgaatcaaaagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aaccaaagagtcattcaacttcatactaacaatgtcgttgagattctgaatcaaaagatt 175
Query: 61 ggcatccatagcgttaatgctacctgcaggtatgaggtttggcaatcctgaatttaccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ggcatccatagcgttaatgctacctgcaggtatgaggtttggcaatcctgaatttaccaa 115
Query: 121 agaatcattaacatggctattcagtgagaaatttgtttcactcttcatcgttgcatcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 agaatcattaacatggctattcagtgagaaatttgtttcactcttcatcgttgcatcatt 55
Query: 181 cttaacctttcccttctcatcaccatcttcagtacatgtagc 222
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 54 cttaacctttcccttctcatcacaatcttcagtacatgtagc 13
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5197
Number of Sequences: 1807
Number of extensions: 5197
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 2
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)